Bioconductor Sgseq coredump

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sgseq coredump

5.6 years ago Sylvain Foisy ▴ 80

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Comment: DESeq - help with pair wise comparisons by bd2000 ▴ 30

Thanks that's great!! I've followed the instructions from the link you sent, is my code correct? By correct I mean, is my code comparing fo…

Comment: SingleR with multiple single cell references by maltethodberg ▴ 180

Great - the approach with merging the atlases and using `block=` worked well!

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ATpoint ★ 4.8k

Underpowerment and notable noise/variability, that's the answer.

Comment: DESeq - help with pair wise comparisons by ATpoint ★ 4.8k

It's exactly this, no? https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#group-specific-condition-effect…

Comment: DESeq: Gene is not flagged as differentially expressed despite count data showin by ktz • 0

Sorry for the repetitive questions! I'm actually just trying to understand it better so that I can explain to the wet lab biologists in my …

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Answer: SingleR with multiple single cell references

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